Degradation#
- class biopax-explorer.biopax.degradation.Degradation(*args, **kwargs)[source]#
Bases:
ConversionClass Degradation
Definition: A conversion in which a pool of macromolecules are degraded into
their elementary units. Usage: This conversion always has a direction of left- to-right and is irreversible. Degraded molecules are always represented on the left, degradation products on the right. Comments: Degradation is a complex abstraction over multiple reactions. Although it obeys law of mass conservation and stoichiometric, the products are rarely specified since they are ubiquitous. Example: Degradation of a protein to amino acids.
code generator : rdfobj (author F.Moreews 2023-2024).
Methods
get_availability()Attribute _availability getter
get_comment()Attribute _comment getter
get_conversionDirection()Attribute _conversionDirection getter
get_dataSource()Attribute _dataSource getter
get_displayName()Attribute _displayName getter
get_evidence()Attribute _evidence getter
get_interactionType()Attribute _interactionType getter
get_left()Attribute _left getter
get_name()Attribute _name getter
get_participant()Attribute _participant getter
get_participantStoichiometry()Attribute _participantStoichiometry getter
get_right()Attribute _right getter
get_spontaneous()Attribute _spontaneous getter
get_standardName()Attribute _standardName getter
get_xref()Attribute _xref getter
attribute_type_by_name
get_uri_string
object_attributes
set_availability
set_comment
set_conversionDirection
set_dataSource
set_displayName
set_evidence
set_interactionType
set_left
set_name
set_participant
set_participantStoichiometry
set_right
set_spontaneous
set_standardName
set_uri_string
set_xref
to_json
type_attributes
Methods Summary
set_uri_string(uristr)to_json()Methods Documentation