GraphDatasetLayerGT#

class biopax-explorer.graph.view.GraphDatasetLayerGT[source]#

Bases: GraphDatasetLayerAbsBKGT

GraphDatasetLayerGT class for Graph-tool backend.

Methods

add_edge
add_node
add_node_impl
build
clone_node
create_or_get_eprop
create_or_get_nprop
defineId
filter_graph
indexNodeAttValues
init_index
initialize
k_shortest_paths
newGraph
nodeId
node_attributes
populate_dataset
revIndexNodeAttValues
selectNodeByAttributeValue
set_node_attributes
visited
write_gexf
write_graphml

Methods Summary

populate_dataset(db, dataset)

Methods Documentation

populate_dataset(db, dataset)[source]#