GraphDatasetLayerNX#

class biopax-explorer.graph.view.GraphDatasetLayerNX[source]#

Bases: GraphDatasetLayerAbs

GraphDatasetLayerNX class for NetworkX backend.

Methods

add_edge
add_node
build
clone_node
defineId
filter_graph
indexNodeAttValues
init_index
initialize
k_shortest_paths
newGraph
nodeId
populate_dataset
revIndexNodeAttValues
selectNodeByAttributeValue
set_node_attributes
visited
write_gexf
write_graphml

Methods Summary

populate_dataset(db, dataset)

Methods Documentation

populate_dataset(db, dataset)[source]#