Transport#
- class biopax-explorer.biopax.transport.Transport(*args, **kwargs)[source]#
Bases:
ConversionClass Transport
Definition: An conversion in which molecules of one or more physicalEntity pools
change their subcellular location and become a member of one or more other physicalEntity pools. A transport interaction does not include the transporter entity, even if one is required in order for the transport to occur. Instead, transporters are linked to transport interactions via the catalysis class. Usage: If there is a simultaneous chemical modification of the participant(s), use transportWithBiochemicalReaction class. Synonyms: translocation. Examples: The movement of Na+ into the cell through an open voltage-gated channel.
code generator : rdfobj (author F.Moreews 2023-2024).
Methods
get_availability()Attribute _availability getter
get_comment()Attribute _comment getter
get_conversionDirection()Attribute _conversionDirection getter
get_dataSource()Attribute _dataSource getter
get_displayName()Attribute _displayName getter
get_evidence()Attribute _evidence getter
get_interactionType()Attribute _interactionType getter
get_left()Attribute _left getter
get_name()Attribute _name getter
get_participant()Attribute _participant getter
get_participantStoichiometry()Attribute _participantStoichiometry getter
get_right()Attribute _right getter
get_spontaneous()Attribute _spontaneous getter
get_standardName()Attribute _standardName getter
get_xref()Attribute _xref getter
attribute_type_by_name
get_uri_string
object_attributes
set_availability
set_comment
set_conversionDirection
set_dataSource
set_displayName
set_evidence
set_interactionType
set_left
set_name
set_participant
set_participantStoichiometry
set_right
set_spontaneous
set_standardName
set_uri_string
set_xref
to_json
type_attributes
Methods Summary
set_uri_string(uristr)to_json()Methods Documentation