Protein#

class biopax-explorer.biopax.protein.Protein(*args, **kwargs)[source]#

Bases: PhysicalEntity

Class Protein

Definition: A physical entity consisting of a sequence of amino acids; a protein

monomer; a single polypeptide chain. Examples: The epidermal growth factor receptor (EGFR) protein.

code generator : rdfobj (author F.Moreews 2023-2024).

Methods

get_availability()	Attribute _availability getter
get_cellularLocation()	Attribute _cellularLocation getter
get_comment()	Attribute _comment getter
get_dataSource()	Attribute _dataSource getter
get_displayName()	Attribute _displayName getter
get_entityReference()	Attribute _entityReference getter
get_evidence()	Attribute _evidence getter
get_feature()	Attribute _feature getter
get_memberPhysicalEntity()	Attribute _memberPhysicalEntity getter
get_name()	Attribute _name getter
get_notFeature()	Attribute _notFeature getter
get_standardName()	Attribute _standardName getter
get_xref()	Attribute _xref getter

attribute_type_by_name
get_uri_string
object_attributes
set_availability
set_cellularLocation
set_comment
set_dataSource
set_displayName
set_entityReference
set_evidence
set_feature
set_memberPhysicalEntity
set_name
set_notFeature
set_standardName
set_uri_string
set_xref
to_json
type_attributes

Methods Summary

attribute_type_by_name()
get_entityReference()	Attribute _entityReference getter
get_uri_string()
object_attributes()
set_entityReference(value)
set_uri_string(uristr)
to_json()
type_attributes()

Methods Documentation

attribute_type_by_name()[source]#

get_entityReference()[source]#

Attribute _entityReference getter

Reference entity for this physical entity.

get_uri_string()[source]#

object_attributes()[source]#

set_entityReference(value)[source]#

set_uri_string(uristr)[source]#

to_json()[source]#

type_attributes()[source]#